Isopentenyl Pyrophosphate (Or, One Kind of Biomolecular Legos)
14th May 2006
Friday, we talked about about carvone. I mentioned that it comes from the same biosynthetic pathway as cholesterol. The precursor to this, as well as a number of other natural products, is isopentenyl pyrophosphate, which we’ll refer to as IPP:

A few things this ends up in are compounds like carvone, limonene, and menthol, shown below:



You’ll notice they all have ten carbons. We’ve talked about carvone, which can smell minty or licorice-like. Limonene, as one reader remarked, has the stereoisomeric smell phenomenon as well - one isomer smells like citrus, the other, pine. Menthol, finally, you’re familiar with. I wouldn’t ascribe any particular taste to it, more of just a cooling sensation.
These are called “monoterpenes.” All chemicals built up from IPP can be termed terpenes of some sort. The monoterpenes come from two molecules of IPP. A fifteen carbon terpene is called a sesquiterpene, and a twenty carbon terpene is called an diterpene. And so on. IPP ends up in stuff as diverse as ginger oil, Vitamin A, rubber, and your very own cholesterol. As I alluded to yesterday, the enzyme pathway leading up to IPP is a drug target for cholesterol reduction. Here is the structure of cholesterol:

If you are particularly observant, anal, or both, you will note that cholesterol is only a C27 compound. This is because some carbon is lost in the conversion of its precursor; it is still a triterpene (six IPPs involved in its production). Its C30 precursor in vivo is lanosterol.
So, the same biosynthetic pathway produces rubber; aromas as diverse as rye, citrus, and mint; cholesterol; and Vitamin A. Neat, huh? See you tomorrow.
June 29th, 2006 at 10:05 pm
[…] As you can see, the structures of canthaxanthin and beta-carotene are very close. All the carotenes are closely related, actually. If you’ve been reading regularly, you’ll probably make the connection that this is a terpene derivative and biosynthetically derived from a previous MoTD, isopentenyl pyrophosphate. […]